Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935638.1_cds_XP_016481422.1_72753
CDS Infomation

[gene=LOC107802428] [db_xref=GeneID:107802428] [protein=laccase-4-like isoform X2] [protein_id=XP_016481422.1] [location=complement(join(23080..23210,23480..24403,24689..24817,25178..25422,25511..25656))] [gbkey=CDS]
Sequence

ATGAAAAATATAACAAGATTATGCTCAACTAAGGCTACTGTAACAGTGAATGGCAAATTT
CCTGGTCCAACTATCTATGCCAGGGAAGATGATACCCTACTTATCAAGGTCGTTAACCAA
GTTCATTATAACCTCACCATCCACTGGCACGGTGTCAAACAAATAAGGACAGGGTGGGCT
GATGGGCCGGCTTACATAACACAATGTCCGATACAGCCAGGGAAAAGCTATGTCTACAAT
TTTACAGTCACAGATCAGAGAGGAACACTATTTTGGCATGCGCACATTCTCTGGCTCAGG
GCAACTGTCCATGGTGCTATTGTCATTCTCCCTAAGCTTGCTTTGCCCTACCCATTCCCC
AACCCCCAAAAGGAAATTCTAATCATTTTAGGTGAATGGTGGAAGTCAGATGTTGAAGCT
GTAGTTGATGAAGCCACACAATTAGGTTTGCCCCCTAATATTTCTGATGCTCACACCATC
AATGGCCTTCCTGGTCCTGTCTCAACCTGCTTATCACAAGAGGGATTCACTTTCCTAGTG
GAGCCAGGCAAGAAGTACTTACTGAGAATAGTCAATGCTGCACTGAATGAAGAACTTTTC
TTTAAGATTGCTGGCCACAAGCTCACTGTGGTTGAAGTAGATTCTTCCTATGTTAAGCCC
TTTAAAGCTGACACCATTTTAACAACTCCAGGACAGACAACAAATGTCATTTTATCAGCT
GATCTTGGAACTGGAAAATACTTAATGGTAACATCACCATACATGGATTCTCCTATCTTA
GTGAATAACAGAACTGCTACTGCTACTTTACAATATGTAGGCACCAATACTTCTTCCACC
ACAACAACTTTAACCGTGCCGCCACCTACAAATGCCACCCCTATTGCAATTAAATTTATG
GACTCTCTCAGAAGCTTGAATTCAAGAAAATATCCAGCAAAAGTCCCACTGACAATTGAT
CATTCCCTTTTTTTCACCATTAGTCTTGGACTCAACCCTTGTGAATCATGTTATAGAGGA
TTTCGAATTGTGGCAGCTATCAATAATGTCACATTTGTTATGCCAAGTGTGTCACTGCTT
AATGCACATTTCTTCAATAAAAGTGGTGTGTTTACTGATGATTTCCCTGGAAATCCAGCA
TATACATTTGACTACACAGGGATTCCACCAGAAAACTTGAGGACAATGGAAGGGACTAGG
CTATATAGACTTGCTTATAATTCTAATGTCCAAGTAATAATGCAAGATACAGGATTGTTG
AGCCCTGAGAACCACCCAATGCATTTACATGGCTTCAATTTCTTTGTGGTTGGAAGAGGC
AGAGGAAATTTTGATCCAGAGGAAGACCCTAAAAAGTTCAACCTTGTTGACCCTGTTGAG
AGGAACACCATAAATGCCCCTTCTGGTGGTTGGGTTGCTATCAGGTTCAGGGCAAATAAT
CCTGGGATTTGGTTTCTCCATTGCCATTTGGAGGTGCACACAACATGGGGACTGAAGATG
GCTTTCGTGGTTGATAATGGAAATGGCCCTGAAGAATCTCTTTTACCTCCTCCCAAAGAT
CTTCCAACATGTTAA

Peptide Sequence

PEP ID

XP_016481422.1
PEP Infomation

PREDICTED: laccase-4-like isoform X2 [Nicotiana tabacum]
Sequence

MKNITRLCSTKATVTVNGKFPGPTIYAREDDTLLIKVVNQVHYNLTIHWHGVKQIRTGWA
DGPAYITQCPIQPGKSYVYNFTVTDQRGTLFWHAHILWLRATVHGAIVILPKLALPYPFP
NPQKEILIILGEWWKSDVEAVVDEATQLGLPPNISDAHTINGLPGPVSTCLSQEGFTFLV
EPGKKYLLRIVNAALNEELFFKIAGHKLTVVEVDSSYVKPFKADTILTTPGQTTNVILSA
DLGTGKYLMVTSPYMDSPILVNNRTATATLQYVGTNTSSTTTTLTVPPPTNATPIAIKFM
DSLRSLNSRKYPAKVPLTIDHSLFFTISLGLNPCESCYRGFRIVAAINNVTFVMPSVSLL
NAHFFNKSGVFTDDFPGNPAYTFDYTGIPPENLRTMEGTRLYRLAYNSNVQVIMQDTGLL
SPENHPMHLHGFNFFVVGRGRGNFDPEEDPKKFNLVDPVERNTINAPSGGWVAIRFRANN
PGIWFLHCHLEVHTTWGLKMAFVVDNGNGPEESLLPPPKDLPTC

Transcript Sequence

Gene sequence data has not been registered.